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deepvariant
Python

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

by google · GitHub
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bioinformaticsdeep-learningdeep-neural-networkBSD-3-ClausePython
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Analyze DNA sequencing data to identify genetic variations and generate reports in standard file formats.

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2026-07-072026-08-31
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📄 About

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

deepvariant has 3.8k stars on GitHub. It has been forked 796 times. deepvariant is written mainly in Python. It has been in active development since 2017. deepvariant is available under the BSD-3-Clause license. Its main topics are bioinformatics, deep-learning, deep-neural-network, deepvariant.

Frequently asked questions

What is deepvariant?

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Is deepvariant open source?

deepvariant is an open-source project. It is released under the BSD-3-Clause license.

Is deepvariant free?

Yes. deepvariant is free and open source — you can use, modify and self-host it.

What license does deepvariant use?

deepvariant is available under the BSD-3-Clause license.

What language is deepvariant written in?

deepvariant is written mainly in Python.

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