Analyze single-cell gene expression data efficiently, even with datasets larger than 100 million cells.
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Free · no card · unsubscribe anytimeSingle-cell analysis in Python. Scales to >100M cells.
scanpy has 2.5k stars on GitHub. It has been forked 756 times. scanpy is written mainly in Python. It has been in active development since 2017. scanpy is available under the BSD-3-Clause license. Its main topics are anndata, bioinformatics, data-science, machine-learning.
What is scanpy?
Single-cell analysis in Python. Scales to >100M cells.
Is scanpy open source?
scanpy is an open-source project. It is released under the BSD-3-Clause license.
Is scanpy free?
Yes. scanpy is free and open source — you can use, modify and self-host it.
What license does scanpy use?
scanpy is available under the BSD-3-Clause license.
What language is scanpy written in?
scanpy is written mainly in Python.
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