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scGPT
Jupyter Notebook

scGPT

by bowang-lab · GitHub
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foundation-modelgptsingle-cellMITJupyter Notebook
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In plain words

Run experiments with a model designed for analyzing single-cell biological data using generative AI.

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1 6041 603
2026-07-202026-08-31
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📄 About

scGPT has 1.6k stars on GitHub. It has been forked 337 times. scGPT is written mainly in Jupyter Notebook. It has been in active development since 2023. scGPT is available under the MIT license. Its main topics are foundation-model, gpt, single-cell.

Frequently asked questions

Is scGPT open source?

scGPT is an open-source project. It is released under the MIT license.

Is scGPT free?

Yes. scGPT is free and open source — you can use, modify and self-host it.

What license does scGPT use?

scGPT is available under the MIT license.

What language is scGPT written in?

scGPT is written mainly in Jupyter Notebook.

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